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Physiol. Genomics 20: 45-54, 2004. First published October 5, 2004; doi:10.1152/physiolgenomics.00196.2003
1094-8341/04 $5.00
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Received 21 November 2003; accepted in final form 27 September 2004.
Physiological Genomics 20:45-54 (2004)
1094-8341/02 $5.00 © 2004 American Physiological Society

Gene expression profiling in chronic copper overload reveals upregulation of Prnp and App

Angela D. Armendariz1, Mauricio Gonzalez2, Alexander V. Loguinov1 and Christopher D. Vulpe1

1 Department of Nutritional Science and Toxicology, University of California, Berkeley, Berkeley, California
2 Instituto de Nutrición y Tecnología de los Alimentos, Universidad de Chile, Santiago, Santiago, Chile

The level at which copper becomes toxic is not clear. Several studies have indicated that copper causes oxidative stress; however, most have tested very high levels of copper exposure. We currently have only a limited understanding of the protective systems that operate in cells chronically exposed to copper. Additionally, the limits of homeostatic regulation are not known, making it difficult to define the milder effects of copper excess. Furthermore, a robust assay to facilitate the diagnosis of copper excess and to distinguish mild, moderate, and severe copper overload is needed. To address these issues, we have investigated the effects on steady-state gene expression of chronic copper overload in a cell culture model system using cDNA microarrays. For this study we utilized cells from genetic models of copper overload: fibroblast cells from two mouse mutants, C57BL/6-Atp7aMobr and C57BL/6-Atp7aModap. These cell lines accumulate copper to abnormally high levels in normal culture media due to a defect in copper export from the cell. We identified 12 differentially expressed genes in common using our outlier identification methods. Surprisingly, our results show no evidence of oxidative stress in the copper-loaded cells. In addition, candidate components perhaps responsible for a copper-specific homeostatic response are identified. The genes that encode for the prion protein and the amyloid-ß precursor protein, two known copper-binding proteins, are upregulated in both cell lines.

microarray; amyloid-ß precursor protein; prion protein; outlier detection; bioinformatics; Menkes disease




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