Physiol. Genomics -- Table of Contents (November 27 2006, 27 [3])

HOME

HELP

FEEDBACK

SUBSCRIPTIONS

Call For Papers: Comparative Genomics:

Colin Selman, Nicola D. Kerrison, Anisha Cooray, Matthew D. W. Piper, Steven J. Lingard, Richard H. Barton, Eugene F. Schuster, Eric Blanc, David Gems, Jeremy K. Nicholson, Janet M. Thornton, Linda Partridge, and Dominic J. Withers: Coordinated multitissue transcriptional and plasma metabonomic profiles following acute caloric restriction in mice
Physiol. Genomics 27: 187-200, 2006. First published August 1, 2006; doi:10.1152/physiolgenomics.00084.2006 [Abstract] [Full Text] [PDF] [Supplemental Figures and Tables]

Michael D. Wilson, Joseph Cheung, Duane W. Martindale, Stephen W. Scherer, and Ben F. Koop: Comparative analysis of the paired immunoglobulin-like receptor (PILR) locus in six mammalian genomes: duplication, conversion, and the birth of new genes
Physiol. Genomics 27: 201-218, 2006. First published August 22, 2006; doi:10.1152/physiolgenomics.00284.2005 [Abstract] [Full Text] [PDF] [Supplementary Data]

Shigeru Saito and Ryuzo Shingai: Evolution of thermoTRP ion channel homologs in vertebrates
Physiol. Genomics 27: 219-230, 2006. First published August 22, 2006; doi:10.1152/physiolgenomics.00322.2005 [Abstract] [Full Text] [PDF] [Supplemental Figures]

Research Articles:

Fabiana Sant'Anna Evangelista and José E. Krieger: Small gene effect and exercise training-induced cardiac hypertrophy in mice: an Ace gene dosage study
Physiol. Genomics 27: 231-236, 2006. First published August 22, 2006; doi:10.1152/physiolgenomics.00022.2006 [Abstract] [Full Text] [PDF]

Gustavo J. J. Silva, Edson D. Moreira, Alexandre C. Pereira, Jose G. Mill, Eduardo M. Krieger, and Jose E. Krieger: ACE gene dosage modulates pressure-induced cardiac hypertrophy in mice and men
Physiol. Genomics 27: 237-244, 2006. First published August 22, 2006; doi:10.1152/physiolgenomics.00023.2006 [Abstract] [Full Text] [PDF] [Supplementary Figure]

M. L. Getchell, H. Li, R. A. Vaishnav, A. S. Borders, J. Witta, N. Subhedar, W. de Villiers, A. J. Stromberg, and T. V. Getchell: Temporal gene expression profiles of target-ablated olfactory epithelium in mice with disrupted expression of scavenger receptor A: impact on macrophages
Physiol. Genomics 27: 245-263, 2006. First published August 1, 2006; doi:10.1152/physiolgenomics.00261.2005 [Abstract] [Full Text] [PDF] [Supplementary Tables]

Asja Wagener, Armin O. Schmitt, Soner Aksu, Werner Schlote, Christina Neuschl, and Gudrun A. Brockmann: Genetic, sex, and diet effects on body weight and obesity in the Berlin Fat Mouse Inbred lines
Physiol. Genomics 27: 264-270, 2006. First published August 15, 2006; doi:10.1152/physiolgenomics.00225.2005 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Lydie Cheval, Luciana Morla, Jean-Marc Elalouf, and Alain Doucet: Kidney collecting duct acid-base "regulon"
Physiol. Genomics 27: 271-281, 2006. First published July 25, 2006; doi:10.1152/physiolgenomics.00069.2006 [Abstract] [Full Text] [PDF] [Supplementary Tables]

P. Christopher LaRosa, Jess Miner, Yuannan Xia, You Zhou, Steve Kachman, and Michael E. Fromm: Trans-10, cis-12 conjugated linoleic acid causes inflammation and delipidation of white adipose tissue in mice: a microarray and histological analysis
Physiol. Genomics 27: 282-294, 2006. First published July 25, 2006; doi:10.1152/physiolgenomics.00076.2006 [Abstract] [Full Text] [PDF] [Supplementary Data]

Catherine Cerutti, Mazen Kurdi, Giampiero Bricca, Wassim Hodroj, Christian Paultre, Jacques Randon, and Marie-Paule Gustin: Transcriptional alterations in the left ventricle of three hypertensive rat models
Physiol. Genomics 27: 295-308, 2006. First published August 1, 2006; doi:10.1152/physiolgenomics.00318.2005 [Abstract] [Full Text] [PDF] [Supplementary Tables and Figure]

Sudarsan Rajan, Sarah S. Williams, Ganapathy Jagatheesan, Rafeeq P. H. Ahmed, Geraldine Fuller-Bicer, Arnold Schwartz, Bruce J. Aronow, and David F. Wieczorek: Microarray analysis of gene expression during early stages of mild and severe cardiac hypertrophy
Physiol. Genomics 27: 309-317, 2006. First published August 1, 2006; doi:10.1152/physiolgenomics.00072.2006 [Abstract] [Full Text] [PDF] [Supplementary Material]

K. F. Rodriguez, L. A. Blomberg, K. A. Zuelke, J. R. Miles, J. E. Alexander, and C. E. Farin: Identification of candidate mRNAs associated with gonadotropin-induced maturation of murine cumulus oocyte complexes using serial analysis of gene expression
Physiol. Genomics 27: 318-327, 2006. First published August 15, 2006; doi:10.1152/physiolgenomics.00309.2005 [Abstract] [Full Text] [PDF]

Christopher J. Martyniuk, Huiling Xiong, Kate Crump, Suzanne Chiu, Ravinder Sardana, Ashlie Nadler, Emily R. Gerrie, Xuhua Xia, and Vance L. Trudeau: Gene expression profiling in the neuroendocrine brain of male goldfish (Carassius auratus) exposed to 17 ${alpha}$ -ethinylestradiol
Physiol. Genomics 27: 328-336, 2006. First published September 5, 2006; doi:10.1152/physiolgenomics.00090.2006 [Abstract] [Full Text] [PDF]

John E. Zimmerman, Wendy Rizzo, Keith R. Shockley, David M. Raizen, Nirinjini Naidoo, Miroslaw Mackiewicz, Gary A. Churchill, and Allan I. Pack: Multiple mechanisms limit the duration of wakefulness in Drosophila brain
Physiol. Genomics 27: 337-350, 2006. First published September 5, 2006; doi:10.1152/physiolgenomics.00030.2006 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Siew Hong Lam, Cecilia Lanny Winata, Yan Tong, Svetlana Korzh, Wen San Lim, Vladimir Korzh, Jan Spitsbergen, Sinnakarupan Mathavan, Lance D. Miller, Edison T. Liu, and Zhiyuan Gong: Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver
Physiol. Genomics 27: 351-361, 2006. First published August 1, 2006; doi:10.1152/physiolgenomics.00201.2005 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Leah C. Solberg, Amber E. Baum, Nasim Ahmadiyeh, Kazuhiro Shimomura, Renhua Li, Fred W. Turek, Joseph S. Takahashi, Gary A. Churchill, and Eva E. Redei: Genetic analysis of the stress-responsive adrenocortical axis
Physiol. Genomics 27: 362-369, 2006. First published August 8, 2006; doi:10.1152/physiolgenomics.00052.2006 [Abstract] [Full Text] [PDF]

Cameron Rink, Sashwati Roy, Savita Khanna, Trenton Rink, Debasis Bagchi, and Chandan K. Sen: Transcriptome of the subcutaneous adipose tissue in response to oral supplementation of type 2 Lepr^db obese diabetic mice with niacin-bound chromium
Physiol. Genomics 27: 370-379, 2006. First published August 29, 2006; doi:10.1152/physiolgenomics.00071.2006 [Abstract] [Full Text] [PDF]

Anthony A. Lanahan, Thomas W. Chittenden, Eileen Mulvihill, Kimberly Smith, Stephen Schwartz, and Michael Simons: Synectin-dependent gene expression in endothelial cells
Physiol. Genomics 27: 380-390, 2006. First published August 29, 2006; doi:10.1152/physiolgenomics.00145.2006 [Abstract] [Full Text] [PDF] [Supplemental Table]

Toolbox:

Yvonne N. Tallini, Bo Shui, Kai Su Greene, Ke-Yu Deng, Robert Doran, Patricia J. Fisher, Warren Zipfel, and Michael I. Kotlikoff: BAC transgenic mice express enhanced green fluorescent protein in central and peripheral cholinergic neurons
Physiol. Genomics 27: 391-397, 2006. First published August 29, 2006; doi:10.1152/physiolgenomics.00092.2006 [Abstract] [Full Text] [PDF]

Cover Caption:

Cover

Cover: Overview of interactions among gene expression profiles in liver and physiological events in visceral adipose, skeletal muscle, and liver tissue during the periparturient period in dairy cows fed ad libitum or provided restricted feeding of moderate-energy diets. Overfeeding of energy prepartum induces chronic hyperinsulinemia, which plays a central role in physiological and molecular adaptations occurring in visceral adipose and liver. These cows have lower capacity to completely oxidize nonesterified fatty acids (NEFA) in liver (↓ ADIPOR2,↓ ACADVL, ↓ ACAA1, ↓ CPT1A mRNA) but have higher capacity to store triacylglycerol postpartum (↑ AGPAT1, ↑ DGAT1, ↑ MTP mRNA). Restricted energy intake prepartum allows for upregulation of fatty acid oxidation, gluconeogenesis, and cholesterogenesis and prevents excessive oxidative stress and DNA damage. Therefore, controlled energy intake prepartum would be advantageous to the cow as the liver “adjusts” its metabolic activity to the onset of parturition. Uncontrolled triacylglycerol accumulation in liver and oxidative stress increases the risk of periparturient health disorders by predisposing the cow to fatty liver and ketosis, which could increase steatotic hepatocyte through upregulation of TP53 mRNA. For details, see Loor JJ, Dann HM, Janovick Guretzky NA, Everts RE, Oliveira R, Green CA, Litherland NB, Rodriguez-Zas SL, Lewin HA, Drackley JK. Plane of nutrition prepartum alters hepatic gene expression and function in dairy cows as assessed by longitudinal transcript and metabolic profiling. Physiol Genomics 27: 29-41, 2006; doi:10.1152/physiolgenomics.00036.2006.